Publications for John W. Cave, Ph.D.

Showing 1 - 35 of 35 total

Willis Lab

PUBLICATION:

Review

John W Cave, Dianna E Willis

G-Quadruplex Regulation of Neural Gene Expression

FEBS J. 2022 Jun;289(12):3284-3303. doi: 10.1111/febs.15900. Epub 2021 May 10.

Abstract on PubMed

Ratan Lab

PUBLICATION:

Manuscript

Amit Kumar, Manisha Vaish, Saravanan S Karuppagounder, Irina Gazaryan, John W Cave, Anatoly A Starkov, Elizabeth T Anderson, Sheng Zhang, John T Pinto, Austin M Rountree, Wang Wang, Ian R Sweet, Rajiv R Ratan

HIF1α stabilization in hypoxia is not oxidant-initiated

Elife. 2021 Oct 1;10:e72873. doi: 10.7554/eLife.72873.

Full-Text on Pubmed

Cho Lab

PUBLICATION:

Journal Article

Il-Doo Kim, John W Cave, Sunghee Cho

Aflibercept, a VEGF (Vascular Endothelial Growth Factor)-Trap, Reduces Vascular Permeability and Stroke-Induced Brain Swelling in Obese Mice

Stroke. 2021 Jul 1;STROKEAHA121034362. doi: 10.1161/STROKEAHA.121.034362. Online ahead of print.

Abstract on PubMed

PUBLICATION:

Journal Article

Ana L Vivinetto, John W Cave

Zeb2 directs EMT-like processes that underlies the glial response to injury

Neural Regeneration Research. 2021 September; Volume 16, Issue 9, Pages 1788-1790

Full-Text on Neural Regeneration Research

Cho Lab

PUBLICATION:

Journal Article

Vivinetto AL, Kim ID, Goldberg DC, Fones L, Brown E, Tarabykin VS, Hill CE, Cho S, Cave JW.

Zeb2 Is a Regulator of Astrogliosis and Functional Recovery after CNS Injury

Cell Rep. 2020 Jun 30;31(13):107834. doi: 10.1016/j.celrep.2020.107834.

Full-Text on Cell Reports

Ratan Lab

PUBLICATION:

Manuscript

Goldberg DC, Fones L, Vivinetto AL, Caufield JT, Ratan RR, Cave JW.

Manipulating Adult Neural Stem and Progenitor Cells with G-Quadruplex Ligands

ACS Chem Neurosci. 2020 May 20;11(10):1504-1518. doi: 10.1021/acschemneuro.0c00194. Epub 2020 Apr 29.

Abstract on PubMed

Ratan Lab

PUBLICATION:

Journal Article

Ishraq Alim, Joseph T. Caulfield, Yingxin Chen, Vivek Swarup, Daniel H. Geschwind, Elena Ivanova, Javier Seravalli, Youxi Ai, Lauren H. Sansing, Emma J. Ste.Marie, Robert J. Hondal, Sushmita Mukherjee, John W. Cave, Botir T. Sagdullaev, Saravanan S. Karuppagounder, Rajiv R. Ratan

Selenium Drives a Transcriptional Adaptive Program to Block Ferroptosis and Treat Stroke

Cell. 2019 May 16;177(5):1262-1279.e25. doi: 10.1016/j.cell.2019.03.032. Epub 2019 May 2.

Abstract on CellPress

PUBLICATION:

Review

Cave JW, Wickiser JK, Mitropoulos AN.

Progress in the development of olfactory-based bioelectronic chemosensors.

Biosens Bioelectron. 2018 Aug 27. pii: S0956-5663(18)30670-5. doi: 10.1016/j.bios.2018.08.063. [Epub ahead of print]

Abstract on PubMed

PUBLICATION:

Journal Article

Ding B, Dobner PR, Mullikin-Kilpatrick D, Wang W, Zhu H, Chow CW, Cave JW, Gronostajski RM, Kilpatrick DL.

BDNF Activates an NFI-Dependent Neurodevelopmental Timing Program By Sequestering NFATc4.

Mol Biol Cell. 2018 Apr 15;29(8):975-987. doi: 10.1091/mbc.E16-08-0595. Epub 2018 Mar 30.

Full-Text on Pubmed

PUBLICATION:

Journal Article

Wang M, Fones L, Cave JW.

Conserved Upstream Regulatory Regions in Mammalian Tyrosine Hydroxylase

Mol Neurobiol. 2018 Sep;55(9):7340-7351. doi: 10.1007/s12035-018-0936-9. Epub 2018 Feb 5.

Abstract on PubMed

PUBLICATION:

Journal Article

Wang M, Cai E, Fujiwara N, Fones L, Brown E, Yanagawa Y, Cave JW.

Odorant Sensory Input Modulates DNA Secondary Structure Formation and Heterogeneous Ribonucleoprotein Recruitment on the Tyrosine Hydroxylase and Glutamic Acid Decarboxylase 1 Promoters in the Olfactory Bulb.

J Neurosci. 2017 May 3;37(18):4778-4789. doi: 10.1523/JNEUROSCI.1363-16.2017. Epub 2017 Apr 14.

Abstract on PubMed

PUBLICATION:

Journal Article

Fujiwara N, Cave JW.

Partial Conservation between Mice and Humans in Olfactory Bulb Interneuron Transcription Factor Codes.

Front Neurosci. 2016 Jul 20;10:337. doi: 10.3389/fnins.2016.00337.

Abstract on PubMed

Ratan Lab

PUBLICATION:

Journal Article

Cave JW, Langley B, Ratan RR.

Nature and nurture meet at the epigenome to modulate disorders of the nervous system.

Neurosci Lett. 2016 Jun 20;625:1-3. doi: 10.1016/j.neulet.2016.05.052. No abstract available.

PubMed

PUBLICATION:

Journal Article

Cave JW, Fujiwara N, Weibman AR, Baker H.

Cytoarchitectural changes in the olfactory bulb of Parkinson's disease patients.

NPJ Parkinsons Dis. 2016 Jun 9;2:16011. doi: 10.1038/npjparkd.2016.11. eCollection 2016.

Abstract on PubMed

PUBLICATION:

Journal Article

Ding B, Cave JW, Dobner PR, Mullikin-Kilpatrick D, Bartzokis M, Zhu H, Chow CW, Gronostajski RM, Kilpatrick DL.

Reciprocal autoregulation by NFI occupancy and ETV1 promotes the developmental expression of dendrite-synapse genes in cerebellar granule neurons.

Mol Biol Cell. 2016 May 1;27(9):1488-99. doi: 10.1091/mbc.E15-07-0476. Epub 2016 Mar 3.

Full-Text on PubMed

Cho Lab / Ratan Lab

PUBLICATION:

Journal Article

Karuppagounder SS, Alim I, Khim SJ, Bourassa MW, Sleiman SF, John R, Thinnes CC, Yeh TL, Demetriades M, Neitemeier S, Cruz D, Gazaryan I, Killilea DW, Morgenstern L, Xi G, Keep RF, Schallert T, Tappero RV, Zhong J, Cho S, Maxfield FR, Holman TR, Culmsee C, Fong GH, Su Y, Ming GL, Song H, Cave JW, Schofield CJ, Colbourne F, Coppola G, Ratan RR

Therapeutic targeting of oxygen-sensing prolyl hydroxylases abrogates ATF4-dependent neuronal death and improves outcomes after brain hemorrhage in several rodent models

Sci Transl Med. 2016 Mar 2;8(328):328ra29. doi: 10.1126/scitranslmed.aac6008.

Abstract on PubMed

Willis Lab

PUBLICATION:

Review

Willis DE, Wang M, Brown E, Fones L, Cave JW.

Selective repression of gene expression in neuropathic pain by the neuron-restrictive silencing factor/repressor element-1 silencing transcription (NRSF/REST).

Neurosci Lett. 2016 Jun 20;625:20-5. doi: 10.1016/j.neulet.2015.12.003. Review.

Abstract on PubMed

PUBLICATION:

Journal Article

Fujiwara N, Mazzola M, Cai E, Wang M, Cave JW.

TMPyP4, a Stabilizer of Nucleic Acid Secondary Structure, Is a Novel Acetylcholinesterase Inhibitor.

PLoS One. 2015 Sep 24;10(9):e0139167. doi: 10.1371/journal.pone.0139167.

Abstract on PubMed

PUBLICATION:

Journal Article

Wang M, Banerjee K, Baker H, Cave JW.

Nucleotide sequence conservation of novel and established cis-regulatory sites within the tyrosine hydroxylase gene promoter.

Front Biol (Beijing). 2015 Feb 1;10(1):74-90.

Full-Text on PubMed

PUBLICATION:

Journal Article

Banerjee K, Wang M, Cai E, Fujiwara N, Baker H, Cave JW.

Regulation of tyrosine hydroxylase transcription by hnRNP K and DNA secondary structure.

Nat Commun. 2014 Dec 10;5:5769. doi: 10.1038/ncomms6769.

Full-Text on PubMed

PUBLICATION:

Review

Cave JW, Wang M, Baker H.

Adult subventricular zone neural stem cells as a potential source of dopaminergic replacement neurons.

Front Neurosci. 2014 Feb 10;8:16. doi: 10.3389/fnins.2014.00016. Review.

Full-Text on PubMed

PUBLICATION:

Review

Banerjee K, Akiba Y, Baker H, Cave JW.

Epigenetic control of neurotransmitter expression in olfactory bulb interneurons.

Int J Dev Neurosci. 2013 Oct;31(6):415-23. doi: 10.1016/j.ijdevneu.2012.11.009. Review.

Full-Text on PubMed

PUBLICATION:

Review

Cave JW.

Selective repression of Notch pathway target gene transcription.

Dev Biol. 2011 Dec 1;360(1):123-31. doi: 10.1016/j.ydbio.2011.09.018. Review.

Abstract on PubMed

PUBLICATION:

Journal Article

Cave JW, Xia L, Caudy M.

Differential regulation of transcription through distinct Suppressor of Hairless DNA binding site architectures during Notch signaling in proneural clusters.

Mol Cell Biol. 2011 Jan;31(1):22-9. doi: 10.1128/MCB.00003-10.

Full-Text on PubMed

PUBLICATION:

Journal Article

Cave JW, Akiba Y, Banerjee K, Bhosle S, Berlin R, Baker H.

Differential regulation of dopaminergic gene expression by Er81.

J Neurosci. 2010 Mar 31;30(13):4717-24. doi: 10.1523/JNEUROSCI.0419-10.2010.

Full-Text on PubMed

Ratan Lab

PUBLICATION:

Journal Article

Akiba Y, Cave JW, Akiba N, Langley B, Ratan RR, Baker H.

Histone deacetylase inhibitors de-repress tyrosine hydroxylase expression in the olfactory bulb and rostral migratory stream.

Biochem Biophys Res Commun. 2010 Mar 19;393(4):673-7. doi: 10.1016/j.bbrc.2010.02.054.

Full-Text on PubMed

PUBLICATION:

Review

Cave JW, Baker H.

Dopamine systems in the forebrain.

Adv Exp Med Biol. 2009;651:15-35. Review.

Full-Text on PubMed

PUBLICATION:

Journal Article

Cave JW, Xia L, Caudy MA.

The Daughterless N-terminus directly mediates synergistic interactions with Notch transcription complexes via the SPS+A DNA transcription code.

BMC Res Notes. 2009 Apr 28;2:65. doi: 10.1186/1756-0500-2-65.

Full-Text on PubMed

PUBLICATION:

Journal Article

Akiba N, Jo S, Akiba Y, Baker H, Cave JW.

Expression of EGR-1 in a subset of olfactory bulb dopaminergic cells.

J Mol Histol. 2009 Apr;40(2):151-5. doi: 10.1007/s10735-009-9217-2.

Full-Text on PubMed

PUBLICATION:

Journal Article

Akiba Y, Sasaki H, Huerta PT, Estevez AG, Baker H, Cave JW.

gamma-Aminobutyric acid-mediated regulation of the activity-dependent olfactory bulb dopaminergic phenotype.

J Neurosci Res. 2009 Aug 1;87(10):2211-21. doi: 10.1002/jnr.22055.

Full-Text on PubMed

PUBLICATION:

Journal Article

Cave JW, Caudy MA.

Promoter-specific co-activation by Drosophila mastermind.

Biochem Biophys Res Commun. 2008 Dec 12;377(2):658-61. doi: 10.1016/j.bbrc.2008.10.035.

Full-Text on PubMed

PUBLICATION:

Journal Article

Saino-Saito S, Cave JW, Akiba Y, Sasaki H, Goto K, Kobayashi K, Berlin R, Baker H.

ER81 and CaMKIV identify anatomically and phenotypically defined subsets of mouse olfactory bulb interneurons.

J Comp Neurol. 2007 Jun 1;502(4):485-96.

Abstract on PubMed

PUBLICATION:

Journal Article

Cave JW, Loh F, Surpris JW, Xia L, Caudy MA.

A DNA transcription code for cell-specific gene activation by notch signaling.

Curr Biol. 2005 Jan 26;15(2):94-104.

Abstract on PubMed

PUBLICATION:

Journal Article

Cave JW, Cho HS, Batchelder AM, Yokota H, Kim R, Wemmer DE.

Solution nuclear magnetic resonance structure of a protein disulfide oxidoreductase from Methanococcus jannaschii.

Protein Sci. 2001 Feb;10(2):384-96.

Abstract on PubMed

PUBLICATION:

Journal Article

Cave JW, Kremer W, Wemmer DE.

Backbone dynamics of sequence specific recognition and binding by the yeast Pho4 bHLH domain probed by NMR.

Protein Sci. 2000 Dec;9(12):2354-65.

Abstract on PubMed

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Publications for John W. Cave, Ph.D.